Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdha3Q91Y16 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Gm15198-201ENSMUST00000117283 177 ntBASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Gm38092-201ENSMUST00000195600 653 ntBASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Gm3961-201ENSMUST00000204425 994 ntBASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Gm6007-201ENSMUST00000208170 823 ntBASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Gm45930-201ENSMUST00000221330 292 ntBASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pcdha3Q91Y16 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Gm43179-201ENSMUST00000198797 275 ntBASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Gm9368-201ENSMUST00000219348 831 ntBASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdha3Q91Y16 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Gm4986-201ENSMUST00000119731 549 ntBASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Gm38158-201ENSMUST00000194617 339 ntBASIC13.04□□□□□ -0.32
Pcdha3Q91Y16 Gm10608-202ENSMUST00000213924 676 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms