Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhga11Q91XY8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Gm13226-201ENSMUST00000117838 404 ntBASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Gm24644-201ENSMUST00000157114 139 ntBASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Gm4271-201ENSMUST00000174444 973 ntBASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Gm27331-201ENSMUST00000183705 60 ntBASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Gm45784-201ENSMUST00000188360 142 ntBASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Gm29705-201ENSMUST00000212598 474 ntBASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhga11Q91XY8 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Gm12742-201ENSMUST00000117326 410 ntBASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.1□□□□□ -0.47
Pcdhga11Q91XY8 Gm44124-201ENSMUST00000204159 472 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms