Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp3Q91W36 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp3Q91W36 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Usp3Q91W36 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Usp3Q91W36 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.92□□□□□ -0.34
Usp3Q91W36 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp3Q91W36 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Usp3Q91W36 Gm23270-201ENSMUST00000104055 131 ntBASIC12.92□□□□□ -0.34
Usp3Q91W36 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.92□□□□□ -0.34
Usp3Q91W36 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.92□□□□□ -0.34
Usp3Q91W36 Gm13570-201ENSMUST00000140763 309 ntBASIC12.92□□□□□ -0.34
Usp3Q91W36 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp3Q91W36 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Gm20482-202ENSMUST00000174729 825 ntBASIC12.92□□□□□ -0.34
Usp3Q91W36 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp3Q91W36 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.92□□□□□ -0.34
Usp3Q91W36 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp3Q91W36 Gm18304-201ENSMUST00000189162 546 ntBASIC12.92□□□□□ -0.34
Usp3Q91W36 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp3Q91W36 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Gm44124-201ENSMUST00000204159 472 ntBASIC12.92□□□□□ -0.34
Usp3Q91W36 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Gm9257-201ENSMUST00000221254 232 ntBASIC12.92□□□□□ -0.34
Usp3Q91W36 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.92□□□□□ -0.34
Usp3Q91W36 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.92□□□□□ -0.34
Usp3Q91W36 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp3Q91W36 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Usp3Q91W36 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.92□□□□□ -0.34
Usp3Q91W36 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.92□□□□□ -0.34
Usp3Q91W36 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp3Q91W36 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Usp3Q91W36 Gm42479-201ENSMUST00000198654 1356 ntBASIC12.92□□□□□ -0.34
Usp3Q91W36 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp3Q91W36 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp3Q91W36 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Usp3Q91W36 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Usp3Q91W36 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Usp3Q91W36 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Usp3Q91W36 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Usp3Q91W36 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Usp3Q91W36 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Usp3Q91W36 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Usp3Q91W36 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Gm13505-201ENSMUST00000121666 817 ntBASIC12.91□□□□□ -0.34
Usp3Q91W36 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.91□□□□□ -0.34
Usp3Q91W36 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Usp3Q91W36 Gm9630-201ENSMUST00000178304 885 ntBASIC12.91□□□□□ -0.34
Usp3Q91W36 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Gm27320-201ENSMUST00000184892 109 ntBASIC12.91□□□□□ -0.34
Usp3Q91W36 Gm8190-201ENSMUST00000199603 586 ntBASIC12.91□□□□□ -0.34
Usp3Q91W36 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.91□□□□□ -0.34
Usp3Q91W36 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.91□□□□□ -0.34
Usp3Q91W36 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Usp3Q91W36 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Usp3Q91W36 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usp3Q91W36 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms