Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdt1Q8R4E9 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdt1Q8R4E9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdt1Q8R4E9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdt1Q8R4E9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Gm14704-201ENSMUST00000120300 874 ntBASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Gm42997-202ENSMUST00000200321 985 ntBASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Gm18584-201ENSMUST00000203098 964 ntBASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Gm19208-201ENSMUST00000213861 912 ntBASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Gm5781-201ENSMUST00000219792 443 ntBASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdt1Q8R4E9 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Gm13461-201ENSMUST00000120980 662 ntBASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Gm22121-201ENSMUST00000175148 54 ntBASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Gm18212-201ENSMUST00000211678 889 ntBASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdt1Q8R4E9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdt1Q8R4E9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdt1Q8R4E9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Cdt1Q8R4E9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdt1Q8R4E9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdt1Q8R4E9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdt1Q8R4E9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms