Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Gm11618-201ENSMUST00000117946 267 ntBASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nudcd3Q8R1N4 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Gm8099-201ENSMUST00000200510 742 ntBASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.43□□□□□ -0.42
Nudcd3Q8R1N4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms