Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Sf3a1Q8K4Z5 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3a1Q8K4Z5 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3a1Q8K4Z5 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3a1Q8K4Z5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3a1Q8K4Z5 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3a1Q8K4Z5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3a1Q8K4Z5 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.27■□□□□ 0.03
Sf3a1Q8K4Z5 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3a1Q8K4Z5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Sf3a1Q8K4Z5 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.27■□□□□ 0.03
Sf3a1Q8K4Z5 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3a1Q8K4Z5 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3a1Q8K4Z5 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sf3a1Q8K4Z5 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Gm37105-201ENSMUST00000192251 2085 ntBASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Gm11531-201ENSMUST00000117614 555 ntBASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Gm2991-201ENSMUST00000173338 480 ntBASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Gm27243-201ENSMUST00000183964 521 ntBASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC15.26■□□□□ 0.03
Sf3a1Q8K4Z5 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Gm25043-201ENSMUST00000158604 212 ntBASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Gm18304-201ENSMUST00000189162 546 ntBASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Gm38266-201ENSMUST00000194931 421 ntBASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Gm43179-201ENSMUST00000198797 275 ntBASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Gm45865-201ENSMUST00000211815 945 ntBASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Cts7-204ENSMUST00000225321 1257 ntBASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Gm10076-201ENSMUST00000073238 384 ntBASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sf3a1Q8K4Z5 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Gm25214-201ENSMUST00000104573 129 ntBASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sf3a1Q8K4Z5 Gm14999-201ENSMUST00000121039 624 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms