Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.32□□□□□ -0.44
Vps50Q8CI71 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Gm37497-201ENSMUST00000195830 798 ntBASIC12.32□□□□□ -0.44
Vps50Q8CI71 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.32□□□□□ -0.44
Vps50Q8CI71 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.32□□□□□ -0.44
Vps50Q8CI71 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.32□□□□□ -0.44
Vps50Q8CI71 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Vps50Q8CI71 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.31□□□□□ -0.44
Vps50Q8CI71 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Gm16177-201ENSMUST00000120728 718 ntBASIC12.31□□□□□ -0.44
Vps50Q8CI71 Gm1335-201ENSMUST00000121653 386 ntBASIC12.31□□□□□ -0.44
Vps50Q8CI71 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.31□□□□□ -0.44
Vps50Q8CI71 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.31□□□□□ -0.44
Vps50Q8CI71 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.31□□□□□ -0.44
Vps50Q8CI71 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.31□□□□□ -0.44
Vps50Q8CI71 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vps50Q8CI71 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.3□□□□□ -0.44
Vps50Q8CI71 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps50Q8CI71 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Vps50Q8CI71 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.3□□□□□ -0.44
Vps50Q8CI71 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.3□□□□□ -0.44
Vps50Q8CI71 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.3□□□□□ -0.44
Vps50Q8CI71 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Gm13392-201ENSMUST00000117708 150 ntBASIC12.3□□□□□ -0.44
Vps50Q8CI71 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.3□□□□□ -0.44
Vps50Q8CI71 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.3□□□□□ -0.44
Vps50Q8CI71 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Gm26927-201ENSMUST00000182385 965 ntBASIC12.3□□□□□ -0.44
Vps50Q8CI71 Gm42693-201ENSMUST00000196779 631 ntBASIC12.3□□□□□ -0.44
Vps50Q8CI71 Gm6013-201ENSMUST00000212264 699 ntBASIC12.3□□□□□ -0.44
Vps50Q8CI71 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Gm10268-201ENSMUST00000085340 555 ntBASIC12.3□□□□□ -0.44
Vps50Q8CI71 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.3□□□□□ -0.44
Vps50Q8CI71 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vps50Q8CI71 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vps50Q8CI71 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms