Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Mir686-201ENSMUST00000102174 109 ntBASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Gm2231-201ENSMUST00000125661 612 ntBASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Gm43630-201ENSMUST00000201550 776 ntBASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Gm9899-201ENSMUST00000065519 555 ntBASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trerf1Q8BXJ2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Gm1335-201ENSMUST00000121653 386 ntBASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Gm8062-201ENSMUST00000139696 444 ntBASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Gm26185-201ENSMUST00000157692 266 ntBASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Gm7029-201ENSMUST00000173226 450 ntBASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trerf1Q8BXJ2 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Gm26927-201ENSMUST00000182385 965 ntBASIC13.21□□□□□ -0.29
Trerf1Q8BXJ2 Gm27514-201ENSMUST00000183692 110 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms