Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm8805-201ENSMUST00000117848 313 ntBASIC12.54□□□□□ -0.4
Usp8Q80U87 Gm12203-201ENSMUST00000118235 598 ntBASIC12.54□□□□□ -0.4
Usp8Q80U87 Gm11814-201ENSMUST00000119515 929 ntBASIC12.54□□□□□ -0.4
Usp8Q80U87 Gm12209-201ENSMUST00000120089 596 ntBASIC12.54□□□□□ -0.4
Usp8Q80U87 Gm16479-201ENSMUST00000121706 932 ntBASIC12.54□□□□□ -0.4
Usp8Q80U87 Gm2231-201ENSMUST00000125661 612 ntBASIC12.54□□□□□ -0.4
Usp8Q80U87 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp8Q80U87 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Gm37497-201ENSMUST00000195830 798 ntBASIC12.54□□□□□ -0.4
Usp8Q80U87 Gm8099-201ENSMUST00000200510 742 ntBASIC12.54□□□□□ -0.4
Usp8Q80U87 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.54□□□□□ -0.4
Usp8Q80U87 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.54□□□□□ -0.4
Usp8Q80U87 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp8Q80U87 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.54□□□□□ -0.4
Usp8Q80U87 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.54□□□□□ -0.4
Usp8Q80U87 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp8Q80U87 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp8Q80U87 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Usp8Q80U87 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp8Q80U87 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.53□□□□□ -0.4
Usp8Q80U87 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Usp8Q80U87 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Usp8Q80U87 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Usp8Q80U87 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Usp8Q80U87 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Gm14704-201ENSMUST00000120300 874 ntBASIC12.53□□□□□ -0.4
Usp8Q80U87 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp8Q80U87 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Usp8Q80U87 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp8Q80U87 Gm27486-201ENSMUST00000184923 80 ntBASIC12.53□□□□□ -0.4
Usp8Q80U87 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp8Q80U87 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.53□□□□□ -0.4
Usp8Q80U87 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Usp8Q80U87 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.53□□□□□ -0.4
Usp8Q80U87 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.53□□□□□ -0.4
Usp8Q80U87 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Usp8Q80U87 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.53□□□□□ -0.4
Usp8Q80U87 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp8Q80U87 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp8Q80U87 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp8Q80U87 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Usp8Q80U87 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp8Q80U87 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.52□□□□□ -0.4
Usp8Q80U87 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp8Q80U87 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp8Q80U87 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Usp8Q80U87 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Usp8Q80U87 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
Usp8Q80U87 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Usp8Q80U87 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Usp8Q80U87 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp8Q80U87 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp8Q80U87 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp8Q80U87 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.52□□□□□ -0.4
Usp8Q80U87 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Usp8Q80U87 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.52□□□□□ -0.41
Usp8Q80U87 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Gm26185-201ENSMUST00000157692 266 ntBASIC12.52□□□□□ -0.41
Usp8Q80U87 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.52□□□□□ -0.41
Usp8Q80U87 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.52□□□□□ -0.41
Usp8Q80U87 Gm37042-201ENSMUST00000193816 581 ntBASIC12.52□□□□□ -0.41
Usp8Q80U87 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.52□□□□□ -0.41
Usp8Q80U87 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp8Q80U87 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Usp8Q80U87 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.52□□□□□ -0.41
Usp8Q80U87 Mir339-201ENSMUST00000083659 96 ntBASIC12.52□□□□□ -0.41
Usp8Q80U87 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms