Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Gm27046-201ENSMUST00000182160 463 ntBASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Gm44069-201ENSMUST00000204898 506 ntBASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Prpf38bQ80SY5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Gm13047-201ENSMUST00000117116 815 ntBASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Gm13408-201ENSMUST00000119822 798 ntBASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Gm13935-201ENSMUST00000121859 798 ntBASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Gm8885-201ENSMUST00000189382 598 ntBASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Prpf38bQ80SY5 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Mir874-201ENSMUST00000104769 76 ntBASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Gm14109-201ENSMUST00000118814 309 ntBASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Gm15547-201ENSMUST00000122152 333 ntBASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Gm10179-201ENSMUST00000086233 688 ntBASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 BC043934-202ENSMUST00000185694 2356 ntBASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms