Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.61□□□□□ -0.55
Pif1Q80SX8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.61□□□□□ -0.55
Pif1Q80SX8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Gm27023-201ENSMUST00000182372 285 ntBASIC11.61□□□□□ -0.55
Pif1Q80SX8 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Gm28450-201ENSMUST00000187349 638 ntBASIC11.61□□□□□ -0.55
Pif1Q80SX8 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.61□□□□□ -0.55
Pif1Q80SX8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.61□□□□□ -0.55
Pif1Q80SX8 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pif1Q80SX8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.6□□□□□ -0.55
Pif1Q80SX8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.6□□□□□ -0.55
Pif1Q80SX8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Gm14921-201ENSMUST00000118643 908 ntBASIC11.6□□□□□ -0.55
Pif1Q80SX8 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.6□□□□□ -0.55
Pif1Q80SX8 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.6□□□□□ -0.55
Pif1Q80SX8 Gm10312-201ENSMUST00000078515 489 ntBASIC11.6□□□□□ -0.55
Pif1Q80SX8 Mir339-201ENSMUST00000083659 96 ntBASIC11.6□□□□□ -0.55
Pif1Q80SX8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pif1Q80SX8 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC11.59□□□□□ -0.55
Pif1Q80SX8 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pif1Q80SX8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms