Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Mir8115-201ENSMUST00000184992 119 ntBASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Gm45219-201ENSMUST00000205602 465 ntBASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup98Q6PFD9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Gm24844-201ENSMUST00000158679 127 ntBASIC14.44□□□□□ -0.1
Nup98Q6PFD9 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.44□□□□□ -0.1
Nup98Q6PFD9 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.44□□□□□ -0.1
Nup98Q6PFD9 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup98Q6PFD9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Gm22920-201ENSMUST00000102175 109 ntBASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Gm11663-201ENSMUST00000117888 290 ntBASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Gm43520-201ENSMUST00000197996 164 ntBASIC14.43□□□□□ -0.1
Nup98Q6PFD9 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup98Q6PFD9 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup98Q6PFD9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms