Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Gm27331-201ENSMUST00000183705 60 ntBASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt39Q6IFX4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Krt39Q6IFX4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Krt39Q6IFX4 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Krt39Q6IFX4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Krt39Q6IFX4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Krt39Q6IFX4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Krt39Q6IFX4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Krt39Q6IFX4 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Krt39Q6IFX4 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Krt39Q6IFX4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Gm8652-201ENSMUST00000181363 964 ntBASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Gm43433-201ENSMUST00000196573 481 ntBASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.77□□□□□ -0.21
Krt39Q6IFX4 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Gm15824-201ENSMUST00000119516 955 ntBASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Gm17150-201ENSMUST00000165577 381 ntBASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Gm24196-201ENSMUST00000179161 110 ntBASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Gm19163-201ENSMUST00000223313 780 ntBASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt39Q6IFX4 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms