Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Gm24891-201ENSMUST00000104391 136 ntBASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Gm13937-201ENSMUST00000121000 988 ntBASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Gm27910-201ENSMUST00000185004 107 ntBASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Scaf8Q6DID3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.61□□□□□ -0.07
Scaf8Q6DID3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.6□□□□□ -0.07
Scaf8Q6DID3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Gm13809-201ENSMUST00000117921 597 ntBASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Mir1901-201ENSMUST00000122616 78 ntBASIC14.6□□□□□ -0.07
Scaf8Q6DID3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Gm43452-201ENSMUST00000201873 991 ntBASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Gm5455-201ENSMUST00000058710 715 ntBASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Scaf8Q6DID3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Gm11509-201ENSMUST00000117358 325 ntBASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Gm14585-201ENSMUST00000120713 634 ntBASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Mir1956-201ENSMUST00000157748 65 ntBASIC14.59□□□□□ -0.07
Scaf8Q6DID3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Gm23771-201ENSMUST00000178702 110 ntBASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Gm10731-201ENSMUST00000181171 448 ntBASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Mir7076-201ENSMUST00000183519 74 ntBASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Gm28686-201ENSMUST00000187404 609 ntBASIC14.59□□□□□ -0.07
Scaf8Q6DID3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.59□□□□□ -0.07
Scaf8Q6DID3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Scaf8Q6DID3 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.59□□□□□ -0.07
Scaf8Q6DID3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms