Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC13.23□□□□□ -0.29
Scube3Q66PY1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Gm14723-201ENSMUST00000118686 215 ntBASIC13.23□□□□□ -0.29
Scube3Q66PY1 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Gm13342-201ENSMUST00000121055 207 ntBASIC13.23□□□□□ -0.29
Scube3Q66PY1 Gm11597-201ENSMUST00000121423 964 ntBASIC13.23□□□□□ -0.29
Scube3Q66PY1 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.23□□□□□ -0.29
Scube3Q66PY1 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.23□□□□□ -0.29
Scube3Q66PY1 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Scube3Q66PY1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scube3Q66PY1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scube3Q66PY1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Gm14539-201ENSMUST00000117527 174 ntBASIC13.22□□□□□ -0.29
Scube3Q66PY1 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Gm13315-201ENSMUST00000120376 991 ntBASIC13.22□□□□□ -0.29
Scube3Q66PY1 Gm16112-201ENSMUST00000159075 382 ntBASIC13.22□□□□□ -0.29
Scube3Q66PY1 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Gm5950-201ENSMUST00000213337 772 ntBASIC13.22□□□□□ -0.29
Scube3Q66PY1 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Cts7-204ENSMUST00000225321 1257 ntBASIC13.22□□□□□ -0.29
Scube3Q66PY1 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.22□□□□□ -0.29
Scube3Q66PY1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.22□□□□□ -0.29
Scube3Q66PY1 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.22□□□□□ -0.29
Scube3Q66PY1 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.22□□□□□ -0.29
Scube3Q66PY1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scube3Q66PY1 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.21□□□□□ -0.29
Scube3Q66PY1 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Scube3Q66PY1 Gm11531-201ENSMUST00000117614 555 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms