Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VclQ64727 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
VclQ64727 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
VclQ64727 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Gm15703-201ENSMUST00000120250 880 ntBASIC12.29□□□□□ -0.44
VclQ64727 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.29□□□□□ -0.44
VclQ64727 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.29□□□□□ -0.44
VclQ64727 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.29□□□□□ -0.44
VclQ64727 Gm38341-201ENSMUST00000195357 515 ntBASIC12.29□□□□□ -0.44
VclQ64727 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.29□□□□□ -0.44
VclQ64727 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.29□□□□□ -0.44
VclQ64727 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
VclQ64727 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
VclQ64727 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.29□□□□□ -0.44
VclQ64727 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VclQ64727 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
VclQ64727 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.28□□□□□ -0.44
VclQ64727 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
VclQ64727 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.28□□□□□ -0.44
VclQ64727 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
VclQ64727 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
VclQ64727 Gm13736-201ENSMUST00000119272 253 ntBASIC12.28□□□□□ -0.44
VclQ64727 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
VclQ64727 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
VclQ64727 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.28□□□□□ -0.44
VclQ64727 Gm45865-201ENSMUST00000211815 945 ntBASIC12.28□□□□□ -0.44
VclQ64727 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
VclQ64727 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
VclQ64727 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.28□□□□□ -0.44
VclQ64727 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.28□□□□□ -0.44
VclQ64727 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.28□□□□□ -0.44
VclQ64727 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
VclQ64727 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VclQ64727 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
VclQ64727 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
VclQ64727 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VclQ64727 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VclQ64727 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VclQ64727 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VclQ64727 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.27□□□□□ -0.45
VclQ64727 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.27□□□□□ -0.45
VclQ64727 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VclQ64727 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
VclQ64727 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
VclQ64727 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.27□□□□□ -0.45
VclQ64727 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.27□□□□□ -0.45
VclQ64727 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.27□□□□□ -0.45
VclQ64727 Gm7783-201ENSMUST00000204795 781 ntBASIC12.27□□□□□ -0.45
VclQ64727 Gm30285-201ENSMUST00000214614 422 ntBASIC12.27□□□□□ -0.45
VclQ64727 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms