Protein–RNA interactions for Protein: Q61687

Atrx, Transcriptional regulator ATRX, mousemouse

Known RBP Predictions only

Length 2,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtrxQ61687 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.33□□□□□ -0.6
AtrxQ61687 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.33□□□□□ -0.6
AtrxQ61687 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Gm12337-201ENSMUST00000119634 400 ntBASIC11.33□□□□□ -0.6
AtrxQ61687 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.33□□□□□ -0.6
AtrxQ61687 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
AtrxQ61687 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
AtrxQ61687 Gm18038-201ENSMUST00000197900 485 ntBASIC11.33□□□□□ -0.6
AtrxQ61687 Gm3619-201ENSMUST00000219947 775 ntBASIC11.33□□□□□ -0.6
AtrxQ61687 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
AtrxQ61687 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
AtrxQ61687 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
AtrxQ61687 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
AtrxQ61687 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
AtrxQ61687 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.32□□□□□ -0.6
AtrxQ61687 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 Gm12419-201ENSMUST00000116649 636 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 Gm15711-201ENSMUST00000118889 535 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 Gm15573-201ENSMUST00000119487 540 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.32□□□□□ -0.6
AtrxQ61687 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.32□□□□□ -0.6
AtrxQ61687 Gm45598-202ENSMUST00000210719 986 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 Gm40879-201ENSMUST00000220759 612 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
AtrxQ61687 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
AtrxQ61687 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
AtrxQ61687 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
AtrxQ61687 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
AtrxQ61687 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.32□□□□□ -0.6
AtrxQ61687 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.32□□□□□ -0.6
AtrxQ61687 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
AtrxQ61687 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 Gzmn-202ENSMUST00000225535 989 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Gm21811-201ENSMUST00000096485 930 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.32□□□□□ -0.6
AtrxQ61687 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
AtrxQ61687 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
AtrxQ61687 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtrxQ61687 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtrxQ61687 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AtrxQ61687 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AtrxQ61687 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
AtrxQ61687 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AtrxQ61687 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AtrxQ61687 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AtrxQ61687 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
AtrxQ61687 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.31□□□□□ -0.6
AtrxQ61687 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
AtrxQ61687 Gm23675-201ENSMUST00000157311 125 ntBASIC11.31□□□□□ -0.6
AtrxQ61687 Gm4482-201ENSMUST00000200876 742 ntBASIC11.31□□□□□ -0.6
AtrxQ61687 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.31□□□□□ -0.6
AtrxQ61687 Gm19009-201ENSMUST00000223072 823 ntBASIC11.31□□□□□ -0.6
AtrxQ61687 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtrxQ61687 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtrxQ61687 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtrxQ61687 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
AtrxQ61687 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms