Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.17□□□□□ -0.46
Vsx2Q61412 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.17□□□□□ -0.46
Vsx2Q61412 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.17□□□□□ -0.46
Vsx2Q61412 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.17□□□□□ -0.46
Vsx2Q61412 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.17□□□□□ -0.46
Vsx2Q61412 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.17□□□□□ -0.46
Vsx2Q61412 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.17□□□□□ -0.46
Vsx2Q61412 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.17□□□□□ -0.46
Vsx2Q61412 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Vsx2Q61412 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vsx2Q61412 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vsx2Q61412 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.16□□□□□ -0.46
Vsx2Q61412 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.16□□□□□ -0.46
Vsx2Q61412 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.16□□□□□ -0.46
Vsx2Q61412 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.16□□□□□ -0.46
Vsx2Q61412 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vsx2Q61412 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.16□□□□□ -0.46
Vsx2Q61412 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.16□□□□□ -0.46
Vsx2Q61412 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.16□□□□□ -0.46
Vsx2Q61412 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.16□□□□□ -0.46
Vsx2Q61412 Gm6007-201ENSMUST00000208170 823 ntBASIC12.16□□□□□ -0.46
Vsx2Q61412 Gm45331-201ENSMUST00000209868 554 ntBASIC12.16□□□□□ -0.46
Vsx2Q61412 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.16□□□□□ -0.46
Vsx2Q61412 Gm5781-201ENSMUST00000219792 443 ntBASIC12.16□□□□□ -0.46
Vsx2Q61412 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Mir339-201ENSMUST00000083659 96 ntBASIC12.16□□□□□ -0.46
Vsx2Q61412 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vsx2Q61412 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.16□□□□□ -0.46
Vsx2Q61412 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.16□□□□□ -0.46
Vsx2Q61412 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.16□□□□□ -0.46
Vsx2Q61412 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.16□□□□□ -0.46
Vsx2Q61412 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Vsx2Q61412 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.16□□□□□ -0.46
Vsx2Q61412 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vsx2Q61412 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx2Q61412 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.15□□□□□ -0.46
Vsx2Q61412 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx2Q61412 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx2Q61412 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.15□□□□□ -0.46
Vsx2Q61412 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx2Q61412 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx2Q61412 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx2Q61412 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx2Q61412 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx2Q61412 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Vsx2Q61412 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.15□□□□□ -0.46
Vsx2Q61412 Gm11793-201ENSMUST00000120433 981 ntBASIC12.15□□□□□ -0.46
Vsx2Q61412 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.15□□□□□ -0.46
Vsx2Q61412 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.15□□□□□ -0.46
Vsx2Q61412 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vsx2Q61412 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.15□□□□□ -0.46
Vsx2Q61412 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.15□□□□□ -0.46
Vsx2Q61412 Gm43118-201ENSMUST00000199149 775 ntBASIC12.15□□□□□ -0.46
Vsx2Q61412 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vsx2Q61412 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Vsx2Q61412 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.15□□□□□ -0.46
Vsx2Q61412 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms