Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Gm24231-201ENSMUST00000104315 133 ntBASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Gm12384-201ENSMUST00000119228 919 ntBASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Gm13492-201ENSMUST00000119772 665 ntBASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Rmrp-201ENSMUST00000157463 271 ntBASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Gm25927-201ENSMUST00000175058 117 ntBASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Gm6222-202ENSMUST00000182143 629 ntBASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Gm18584-201ENSMUST00000203098 964 ntBASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Gm5904-201ENSMUST00000210286 865 ntBASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav5d-4Q5R1F6 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Trav5d-4Q5R1F6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Gm15824-201ENSMUST00000119516 955 ntBASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Gm11591-201ENSMUST00000120063 702 ntBASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Gm44124-201ENSMUST00000204159 472 ntBASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Daam2-202ENSMUST00000224595 1926 ntBASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav5d-4Q5R1F6 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5d-4Q5R1F6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms