Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Gm11511-201ENSMUST00000118146 540 ntBASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Gm43852-201ENSMUST00000202098 917 ntBASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Gm43997-201ENSMUST00000203986 1005 ntBASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vps13aQ5H8C4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Gm13351-201ENSMUST00000118087 414 ntBASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Gm26875-201ENSMUST00000181006 950 ntBASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Gm38007-201ENSMUST00000192187 313 ntBASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Gm24328-201ENSMUST00000175104 67 ntBASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Gm27956-201ENSMUST00000175604 260 ntBASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vps13aQ5H8C4 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Vps13aQ5H8C4 AC159810.1-201ENSMUST00000214838 1480 ntBASIC12□□□□□ -0.49
Vps13aQ5H8C4 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12□□□□□ -0.49
Vps13aQ5H8C4 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Gm7211-201ENSMUST00000172692 1118 ntBASIC12□□□□□ -0.49
Vps13aQ5H8C4 Gm29304-201ENSMUST00000186555 695 ntBASIC12□□□□□ -0.49
Vps13aQ5H8C4 Gm29223-201ENSMUST00000188867 695 ntBASIC12□□□□□ -0.49
Vps13aQ5H8C4 Gm29499-201ENSMUST00000189151 486 ntBASIC12□□□□□ -0.49
Vps13aQ5H8C4 Gm28329-201ENSMUST00000191208 689 ntBASIC12□□□□□ -0.49
Vps13aQ5H8C4 Gm29171-201ENSMUST00000191397 486 ntBASIC12□□□□□ -0.49
Vps13aQ5H8C4 Gm37921-201ENSMUST00000194333 695 ntBASIC12□□□□□ -0.49
Vps13aQ5H8C4 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps13aQ5H8C4 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Gm13700-201ENSMUST00000118624 1128 ntBASIC12□□□□□ -0.49
Vps13aQ5H8C4 Gm8197-202ENSMUST00000193422 934 ntBASIC12□□□□□ -0.49
Vps13aQ5H8C4 AC187103.3-201ENSMUST00000225725 646 ntBASIC12□□□□□ -0.49
Vps13aQ5H8C4 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Gm22379-201ENSMUST00000157480 131 ntBASIC12□□□□□ -0.49
Vps13aQ5H8C4 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12□□□□□ -0.49
Vps13aQ5H8C4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps13aQ5H8C4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps13aQ5H8C4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC11.99□□□□□ -0.49
Vps13aQ5H8C4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps13aQ5H8C4 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.99□□□□□ -0.49
Vps13aQ5H8C4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Vps13aQ5H8C4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps13aQ5H8C4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Vps13aQ5H8C4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vps13aQ5H8C4 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps13aQ5H8C4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps13aQ5H8C4 Gm24078-201ENSMUST00000158184 103 ntBASIC11.99□□□□□ -0.49
Vps13aQ5H8C4 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.99□□□□□ -0.49
Vps13aQ5H8C4 Gm9022-201ENSMUST00000182482 992 ntBASIC11.99□□□□□ -0.49
Vps13aQ5H8C4 Gm2345-201ENSMUST00000193451 589 ntBASIC11.99□□□□□ -0.49
Vps13aQ5H8C4 Gm37782-201ENSMUST00000194879 678 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms