Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm23363-201ENSMUST00000175024 79 ntBASIC12.34□□□□□ -0.43
Scn2bQ56A07 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Gm27731-201ENSMUST00000185192 107 ntBASIC12.34□□□□□ -0.43
Scn2bQ56A07 Gm29127-201ENSMUST00000188304 517 ntBASIC12.34□□□□□ -0.43
Scn2bQ56A07 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Gm8099-201ENSMUST00000200510 742 ntBASIC12.34□□□□□ -0.43
Scn2bQ56A07 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.34□□□□□ -0.43
Scn2bQ56A07 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Scn2bQ56A07 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn2bQ56A07 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Scn2bQ56A07 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn2bQ56A07 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scn2bQ56A07 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scn2bQ56A07 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Scn2bQ56A07 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scn2bQ56A07 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scn2bQ56A07 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.33□□□□□ -0.44
Scn2bQ56A07 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Gm2231-201ENSMUST00000125661 612 ntBASIC12.33□□□□□ -0.44
Scn2bQ56A07 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Gm4271-201ENSMUST00000174444 973 ntBASIC12.33□□□□□ -0.44
Scn2bQ56A07 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.33□□□□□ -0.44
Scn2bQ56A07 Gm45784-201ENSMUST00000188360 142 ntBASIC12.33□□□□□ -0.44
Scn2bQ56A07 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Gm38092-201ENSMUST00000195600 653 ntBASIC12.33□□□□□ -0.44
Scn2bQ56A07 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.33□□□□□ -0.44
Scn2bQ56A07 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.33□□□□□ -0.44
Scn2bQ56A07 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.33□□□□□ -0.44
Scn2bQ56A07 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.33□□□□□ -0.44
Scn2bQ56A07 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.33□□□□□ -0.44
Scn2bQ56A07 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn2bQ56A07 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Gm12384-201ENSMUST00000119228 919 ntBASIC12.32□□□□□ -0.44
Scn2bQ56A07 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.32□□□□□ -0.44
Scn2bQ56A07 Gm12363-201ENSMUST00000122250 668 ntBASIC12.32□□□□□ -0.44
Scn2bQ56A07 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Gm26185-201ENSMUST00000157692 266 ntBASIC12.32□□□□□ -0.44
Scn2bQ56A07 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Gm19184-201ENSMUST00000196798 928 ntBASIC12.32□□□□□ -0.44
Scn2bQ56A07 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.32□□□□□ -0.44
Scn2bQ56A07 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms