Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Arhgef40Q3UPH7 Gm5537-201ENSMUST00000091117 1252 ntBASIC18.02■□□□□ 0.47
Arhgef40Q3UPH7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Arhgef40Q3UPH7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Arhgef40Q3UPH7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Arhgef40Q3UPH7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Arhgef40Q3UPH7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Arhgef40Q3UPH7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Arhgef40Q3UPH7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Gm6903-201ENSMUST00000160509 1366 ntBASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Gm43447-201ENSMUST00000198471 1535 ntBASIC18.01■□□□□ 0.47
Arhgef40Q3UPH7 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Gm12419-201ENSMUST00000116649 636 ntBASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Gm3150-201ENSMUST00000166418 204 ntBASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Gm38151-201ENSMUST00000195085 289 ntBASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC18■□□□□ 0.47
Arhgef40Q3UPH7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Gm15207-201ENSMUST00000119259 442 ntBASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Gm29499-201ENSMUST00000189151 486 ntBASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Gm28329-201ENSMUST00000191208 689 ntBASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Gm29171-201ENSMUST00000191397 486 ntBASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 AC140375.1-201ENSMUST00000225421 694 ntBASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 CT009489.1-201ENSMUST00000227740 1893 ntBASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Arhgef40Q3UPH7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Arhgef40Q3UPH7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Arhgef40Q3UPH7 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Arhgef40Q3UPH7 Gm13668-201ENSMUST00000119237 1001 ntBASIC17.98■□□□□ 0.47
Arhgef40Q3UPH7 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC17.98■□□□□ 0.47
Arhgef40Q3UPH7 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC17.98■□□□□ 0.47
Arhgef40Q3UPH7 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
Arhgef40Q3UPH7 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC17.98■□□□□ 0.47
Arhgef40Q3UPH7 Gm45113-201ENSMUST00000207518 165 ntBASIC17.98■□□□□ 0.47
Arhgef40Q3UPH7 AC154184.3-201ENSMUST00000225620 1090 ntBASIC17.98■□□□□ 0.47
Arhgef40Q3UPH7 Mirlet7i-201ENSMUST00000083472 85 ntBASIC17.98■□□□□ 0.47
Arhgef40Q3UPH7 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms