Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.37□□□□□ -0.75
Tff1Q08423 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tff1Q08423 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Gm13813-201ENSMUST00000120998 787 ntBASIC10.37□□□□□ -0.75
Tff1Q08423 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.37□□□□□ -0.75
Tff1Q08423 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.37□□□□□ -0.75
Tff1Q08423 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Tff1Q08423 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.37□□□□□ -0.75
Tff1Q08423 Gm22331-201ENSMUST00000158066 136 ntBASIC10.37□□□□□ -0.75
Tff1Q08423 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tff1Q08423 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.37□□□□□ -0.75
Tff1Q08423 Gm18054-201ENSMUST00000207539 555 ntBASIC10.37□□□□□ -0.75
Tff1Q08423 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.37□□□□□ -0.75
Tff1Q08423 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Gm16372-201ENSMUST00000073088 450 ntBASIC10.37□□□□□ -0.75
Tff1Q08423 Gm10012-201ENSMUST00000078252 192 ntBASIC10.37□□□□□ -0.75
Tff1Q08423 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.37□□□□□ -0.75
Tff1Q08423 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Tff1Q08423 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Tff1Q08423 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tff1Q08423 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.37□□□□□ -0.75
Tff1Q08423 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.37□□□□□ -0.75
Tff1Q08423 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tff1Q08423 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.36□□□□□ -0.75
Tff1Q08423 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Tff1Q08423 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.36□□□□□ -0.75
Tff1Q08423 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Tff1Q08423 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Tff1Q08423 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Gm23931-201ENSMUST00000103842 109 ntBASIC10.36□□□□□ -0.75
Tff1Q08423 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.36□□□□□ -0.75
Tff1Q08423 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.36□□□□□ -0.75
Tff1Q08423 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.36□□□□□ -0.75
Tff1Q08423 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.36□□□□□ -0.75
Tff1Q08423 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.36□□□□□ -0.75
Tff1Q08423 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.36□□□□□ -0.75
Tff1Q08423 Gm19184-201ENSMUST00000196798 928 ntBASIC10.36□□□□□ -0.75
Tff1Q08423 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.36□□□□□ -0.75
Tff1Q08423 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.36□□□□□ -0.75
Tff1Q08423 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.36□□□□□ -0.75
Tff1Q08423 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Gm9823-201ENSMUST00000051212 327 ntBASIC10.36□□□□□ -0.75
Tff1Q08423 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.36□□□□□ -0.75
Tff1Q08423 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tff1Q08423 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms