Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Sox4Q06831 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sox4Q06831 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sox4Q06831 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.27□□□□□ -0.44
Sox4Q06831 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox4Q06831 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox4Q06831 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox4Q06831 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sox4Q06831 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.27□□□□□ -0.45
Sox4Q06831 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 Gm14726-201ENSMUST00000120623 896 ntBASIC12.27□□□□□ -0.45
Sox4Q06831 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
Sox4Q06831 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.27□□□□□ -0.45
Sox4Q06831 Gm18304-201ENSMUST00000189162 546 ntBASIC12.27□□□□□ -0.45
Sox4Q06831 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sox4Q06831 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.27□□□□□ -0.45
Sox4Q06831 Gm37259-201ENSMUST00000193903 849 ntBASIC12.27□□□□□ -0.45
Sox4Q06831 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.27□□□□□ -0.45
Sox4Q06831 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.27□□□□□ -0.45
Sox4Q06831 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.27□□□□□ -0.45
Sox4Q06831 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sox4Q06831 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sox4Q06831 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sox4Q06831 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.27□□□□□ -0.45
Sox4Q06831 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.27□□□□□ -0.45
Sox4Q06831 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox4Q06831 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox4Q06831 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.26□□□□□ -0.45
Sox4Q06831 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox4Q06831 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox4Q06831 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.26□□□□□ -0.45
Sox4Q06831 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Sox4Q06831 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Sox4Q06831 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Sox4Q06831 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox4Q06831 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox4Q06831 Gm22323-201ENSMUST00000103832 109 ntBASIC12.26□□□□□ -0.45
Sox4Q06831 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.26□□□□□ -0.45
Sox4Q06831 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.26□□□□□ -0.45
Sox4Q06831 Gm24845-201ENSMUST00000158034 109 ntBASIC12.26□□□□□ -0.45
Sox4Q06831 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox4Q06831 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox4Q06831 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.26□□□□□ -0.45
Sox4Q06831 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.26□□□□□ -0.45
Sox4Q06831 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.26□□□□□ -0.45
Sox4Q06831 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Sox4Q06831 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Sox4Q06831 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox4Q06831 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox4Q06831 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Sox4Q06831 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Sox4Q06831 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox4Q06831 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sox4Q06831 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Sox4Q06831 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Sox4Q06831 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sox4Q06831 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.25□□□□□ -0.45
Sox4Q06831 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sox4Q06831 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.25□□□□□ -0.45
Sox4Q06831 Gm42937-201ENSMUST00000197360 752 ntBASIC12.25□□□□□ -0.45
Sox4Q06831 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.25□□□□□ -0.45
Sox4Q06831 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms