Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Cxcr5Q04683 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cxcr5Q04683 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcr5Q04683 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cxcr5Q04683 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcr5Q04683 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.85□□□□□ -0.51
Cxcr5Q04683 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcr5Q04683 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcr5Q04683 Paupar-201ENSMUST00000194826 3482 ntBASIC11.85□□□□□ -0.51
Cxcr5Q04683 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.85□□□□□ -0.51
Cxcr5Q04683 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.85□□□□□ -0.51
Cxcr5Q04683 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcr5Q04683 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcr5Q04683 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.85□□□□□ -0.51
Cxcr5Q04683 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
Cxcr5Q04683 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cxcr5Q04683 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cxcr5Q04683 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.85□□□□□ -0.51
Cxcr5Q04683 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.85□□□□□ -0.51
Cxcr5Q04683 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cxcr5Q04683 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.84□□□□□ -0.51
Cxcr5Q04683 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.84□□□□□ -0.51
Cxcr5Q04683 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.84□□□□□ -0.51
Cxcr5Q04683 Gm11918-201ENSMUST00000121660 179 ntBASIC11.84□□□□□ -0.51
Cxcr5Q04683 Gm12363-201ENSMUST00000122250 668 ntBASIC11.84□□□□□ -0.51
Cxcr5Q04683 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.84□□□□□ -0.51
Cxcr5Q04683 Gm38092-201ENSMUST00000195600 653 ntBASIC11.84□□□□□ -0.51
Cxcr5Q04683 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Gm45384-201ENSMUST00000210451 277 ntBASIC11.84□□□□□ -0.51
Cxcr5Q04683 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Gm24136-201ENSMUST00000083374 165 ntBASIC11.84□□□□□ -0.51
Cxcr5Q04683 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cxcr5Q04683 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cxcr5Q04683 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cxcr5Q04683 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cxcr5Q04683 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cxcr5Q04683 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Gm17794-201ENSMUST00000220252 955 ntBASIC11.83□□□□□ -0.52
Cxcr5Q04683 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.83□□□□□ -0.52
Cxcr5Q04683 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.83□□□□□ -0.52
Cxcr5Q04683 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Gm6180-201ENSMUST00000065243 498 ntBASIC11.83□□□□□ -0.52
Cxcr5Q04683 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.83□□□□□ -0.52
Cxcr5Q04683 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.83□□□□□ -0.52
Cxcr5Q04683 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cxcr5Q04683 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms