Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Smn1P97801 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.67□□□□□ -0.7
Smn1P97801 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.67□□□□□ -0.7
Smn1P97801 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.67□□□□□ -0.7
Smn1P97801 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.67□□□□□ -0.7
Smn1P97801 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Gm23363-201ENSMUST00000175024 79 ntBASIC10.67□□□□□ -0.7
Smn1P97801 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.67□□□□□ -0.7
Smn1P97801 Gm8227-201ENSMUST00000223306 571 ntBASIC10.67□□□□□ -0.7
Smn1P97801 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.67□□□□□ -0.7
Smn1P97801 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.67□□□□□ -0.7
Smn1P97801 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.67□□□□□ -0.7
Smn1P97801 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.67□□□□□ -0.7
Smn1P97801 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Smn1P97801 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.67□□□□□ -0.7
Smn1P97801 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Smn1P97801 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Smn1P97801 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Smn1P97801 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.66□□□□□ -0.7
Smn1P97801 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.66□□□□□ -0.7
Smn1P97801 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Smn1P97801 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Smn1P97801 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Smn1P97801 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.66□□□□□ -0.7
Smn1P97801 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Gm13323-201ENSMUST00000120245 1151 ntBASIC10.66□□□□□ -0.7
Smn1P97801 Gm13123-201ENSMUST00000122173 492 ntBASIC10.66□□□□□ -0.7
Smn1P97801 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.66□□□□□ -0.7
Smn1P97801 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.66□□□□□ -0.7
Smn1P97801 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.66□□□□□ -0.7
Smn1P97801 Mir6392-201ENSMUST00000184924 108 ntBASIC10.66□□□□□ -0.7
Smn1P97801 Gm10576-201ENSMUST00000191927 825 ntBASIC10.66□□□□□ -0.7
Smn1P97801 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.66□□□□□ -0.7
Smn1P97801 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.66□□□□□ -0.7
Smn1P97801 Gm20949-201ENSMUST00000206478 952 ntBASIC10.66□□□□□ -0.7
Smn1P97801 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.66□□□□□ -0.7
Smn1P97801 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.66□□□□□ -0.7
Smn1P97801 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.66□□□□□ -0.7
Smn1P97801 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Smn1P97801 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Smn1P97801 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Smn1P97801 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.66□□□□□ -0.7
Smn1P97801 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.66□□□□□ -0.7
Smn1P97801 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.66□□□□□ -0.7
Smn1P97801 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.66□□□□□ -0.7
Smn1P97801 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Smn1P97801 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smn1P97801 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smn1P97801 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smn1P97801 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smn1P97801 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smn1P97801 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smn1P97801 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Smn1P97801 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.65□□□□□ -0.7
Smn1P97801 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.65□□□□□ -0.7
Smn1P97801 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Smn1P97801 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.65□□□□□ -0.7
Smn1P97801 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms