Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.58■□□□□ 0.08
Smarcc1P97496 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Smarcc1P97496 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcc1P97496 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcc1P97496 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcc1P97496 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smarcc1P97496 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Smarcc1P97496 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Smarcc1P97496 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Smarcc1P97496 Gm24231-201ENSMUST00000104315 133 ntBASIC15.57■□□□□ 0.08
Smarcc1P97496 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC15.57■□□□□ 0.08
Smarcc1P97496 Gm12795-201ENSMUST00000117594 539 ntBASIC15.57■□□□□ 0.08
Smarcc1P97496 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Smarcc1P97496 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 Gm10288-201ENSMUST00000084614 537 ntBASIC15.57■□□□□ 0.08
Smarcc1P97496 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.57■□□□□ 0.08
Smarcc1P97496 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Smarcc1P97496 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Smarcc1P97496 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
Smarcc1P97496 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Smarcc1P97496 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.57■□□□□ 0.08
Smarcc1P97496 Gm14150-201ENSMUST00000122404 1354 ntBASIC15.57■□□□□ 0.08
Smarcc1P97496 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.57■□□□□ 0.08
Smarcc1P97496 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.57■□□□□ 0.08
Smarcc1P97496 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smarcc1P97496 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Smarcc1P97496 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.56■□□□□ 0.08
Smarcc1P97496 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.56■□□□□ 0.08
Smarcc1P97496 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.56■□□□□ 0.08
Smarcc1P97496 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC15.56■□□□□ 0.08
Smarcc1P97496 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.56■□□□□ 0.08
Smarcc1P97496 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Smarcc1P97496 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC15.56■□□□□ 0.08
Smarcc1P97496 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC15.56■□□□□ 0.08
Smarcc1P97496 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC15.56■□□□□ 0.08
Smarcc1P97496 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC15.56■□□□□ 0.08
Smarcc1P97496 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC15.56■□□□□ 0.08
Smarcc1P97496 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC15.56■□□□□ 0.08
Smarcc1P97496 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.56■□□□□ 0.08
Smarcc1P97496 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Gm28719-201ENSMUST00000187779 1757 ntBASIC15.56■□□□□ 0.08
Smarcc1P97496 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Smarcc1P97496 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Smarcc1P97496 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Smarcc1P97496 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smarcc1P97496 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcc1P97496 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcc1P97496 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcc1P97496 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcc1P97496 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcc1P97496 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Smarcc1P97496 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcc1P97496 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Smarcc1P97496 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcc1P97496 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcc1P97496 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcc1P97496 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Smarcc1P97496 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcc1P97496 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcc1P97496 Gm13809-201ENSMUST00000117921 597 ntBASIC15.55■□□□□ 0.08
Smarcc1P97496 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC15.55■□□□□ 0.08
Smarcc1P97496 Gm8199-201ENSMUST00000121323 823 ntBASIC15.55■□□□□ 0.08
Smarcc1P97496 Gm11675-201ENSMUST00000121873 832 ntBASIC15.55■□□□□ 0.08
Smarcc1P97496 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.55■□□□□ 0.08
Smarcc1P97496 Gm7666-201ENSMUST00000146631 819 ntBASIC15.55■□□□□ 0.08
Smarcc1P97496 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smarcc1P97496 Gm23119-201ENSMUST00000158610 140 ntBASIC15.55■□□□□ 0.08
Smarcc1P97496 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms