Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim43cP86449 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trim43cP86449 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim43cP86449 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.56□□□□□ -0.24
Trim43cP86449 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim43cP86449 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim43cP86449 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43cP86449 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim43cP86449 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.55□□□□□ -0.24
Trim43cP86449 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.55□□□□□ -0.24
Trim43cP86449 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim43cP86449 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Gm14999-201ENSMUST00000121039 624 ntBASIC13.55□□□□□ -0.24
Trim43cP86449 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.55□□□□□ -0.24
Trim43cP86449 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Gm17420-201ENSMUST00000164753 153 ntBASIC13.55□□□□□ -0.24
Trim43cP86449 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.55□□□□□ -0.24
Trim43cP86449 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.55□□□□□ -0.24
Trim43cP86449 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Trim43cP86449 Gm27572-201ENSMUST00000183702 255 ntBASIC13.55□□□□□ -0.24
Trim43cP86449 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.55□□□□□ -0.24
Trim43cP86449 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim43cP86449 Gm43630-201ENSMUST00000201550 776 ntBASIC13.55□□□□□ -0.24
Trim43cP86449 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trim43cP86449 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.55□□□□□ -0.24
Trim43cP86449 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43cP86449 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim43cP86449 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim43cP86449 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trim43cP86449 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim43cP86449 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.54□□□□□ -0.24
Trim43cP86449 Gm29396-201ENSMUST00000185659 716 ntBASIC13.54□□□□□ -0.24
Trim43cP86449 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.54□□□□□ -0.24
Trim43cP86449 Gm42627-201ENSMUST00000197347 224 ntBASIC13.54□□□□□ -0.24
Trim43cP86449 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.54□□□□□ -0.24
Trim43cP86449 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trim43cP86449 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.54□□□□□ -0.24
Trim43cP86449 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trim43cP86449 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.54□□□□□ -0.24
Trim43cP86449 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim43cP86449 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim43cP86449 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms