Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.81□□□□□ -0.36
Msx3P70354 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Msx3P70354 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.8□□□□□ -0.36
Msx3P70354 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.8□□□□□ -0.36
Msx3P70354 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Msx3P70354 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Msx3P70354 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Msx3P70354 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Msx3P70354 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Msx3P70354 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Msx3P70354 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Gm13736-201ENSMUST00000119272 253 ntBASIC12.8□□□□□ -0.36
Msx3P70354 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.8□□□□□ -0.36
Msx3P70354 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.8□□□□□ -0.36
Msx3P70354 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Msx3P70354 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Gm18304-201ENSMUST00000189162 546 ntBASIC12.8□□□□□ -0.36
Msx3P70354 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Msx3P70354 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Msx3P70354 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msx3P70354 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Msx3P70354 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Msx3P70354 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.79□□□□□ -0.36
Msx3P70354 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.79□□□□□ -0.36
Msx3P70354 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Gm13226-201ENSMUST00000117838 404 ntBASIC12.79□□□□□ -0.36
Msx3P70354 Gm14660-201ENSMUST00000119809 575 ntBASIC12.79□□□□□ -0.36
Msx3P70354 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Msx3P70354 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.79□□□□□ -0.36
Msx3P70354 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.79□□□□□ -0.36
Msx3P70354 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.79□□□□□ -0.36
Msx3P70354 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.79□□□□□ -0.36
Msx3P70354 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.79□□□□□ -0.36
Msx3P70354 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msx3P70354 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms