Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Lsm6P62313 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.96□□□□□ -0.65
Lsm6P62313 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
Lsm6P62313 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.96□□□□□ -0.65
Lsm6P62313 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm6P62313 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm6P62313 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm6P62313 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm6P62313 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm6P62313 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.96□□□□□ -0.66
Lsm6P62313 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm6P62313 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm6P62313 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm6P62313 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm6P62313 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm6P62313 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm6P62313 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.95□□□□□ -0.66
Lsm6P62313 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.95□□□□□ -0.66
Lsm6P62313 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Lsm6P62313 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Gm13315-201ENSMUST00000120376 991 ntBASIC10.95□□□□□ -0.66
Lsm6P62313 Gm11597-201ENSMUST00000121423 964 ntBASIC10.95□□□□□ -0.66
Lsm6P62313 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.95□□□□□ -0.66
Lsm6P62313 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.95□□□□□ -0.66
Lsm6P62313 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Gm9022-201ENSMUST00000182482 992 ntBASIC10.95□□□□□ -0.66
Lsm6P62313 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Lsm6P62313 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.95□□□□□ -0.66
Lsm6P62313 Gm6007-201ENSMUST00000208170 823 ntBASIC10.95□□□□□ -0.66
Lsm6P62313 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.95□□□□□ -0.66
Lsm6P62313 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Lsm6P62313 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Lsm6P62313 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm6P62313 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Lsm6P62313 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.94□□□□□ -0.66
Lsm6P62313 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.94□□□□□ -0.66
Lsm6P62313 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.94□□□□□ -0.66
Lsm6P62313 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Lsm6P62313 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.94□□□□□ -0.66
Lsm6P62313 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Gm12314-201ENSMUST00000118104 538 ntBASIC10.94□□□□□ -0.66
Lsm6P62313 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Lsm6P62313 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Lsm6P62313 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.94□□□□□ -0.66
Lsm6P62313 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.94□□□□□ -0.66
Lsm6P62313 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.94□□□□□ -0.66
Lsm6P62313 Gm27243-201ENSMUST00000183964 521 ntBASIC10.94□□□□□ -0.66
Lsm6P62313 Gm27390-201ENSMUST00000184516 176 ntBASIC10.94□□□□□ -0.66
Lsm6P62313 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms