Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cdh11P55288 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.39□□□□□ -0.59
Cdh11P55288 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Cdh11P55288 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.39□□□□□ -0.59
Cdh11P55288 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.39□□□□□ -0.59
Cdh11P55288 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.39□□□□□ -0.59
Cdh11P55288 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.39□□□□□ -0.59
Cdh11P55288 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cdh11P55288 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.39□□□□□ -0.59
Cdh11P55288 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.39□□□□□ -0.59
Cdh11P55288 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Cdh11P55288 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh11P55288 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cdh11P55288 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cdh11P55288 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Cdh11P55288 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.38□□□□□ -0.59
Cdh11P55288 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cdh11P55288 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Gm13369-201ENSMUST00000119442 987 ntBASIC11.38□□□□□ -0.59
Cdh11P55288 Gm16177-201ENSMUST00000120728 718 ntBASIC11.38□□□□□ -0.59
Cdh11P55288 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.38□□□□□ -0.59
Cdh11P55288 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.38□□□□□ -0.59
Cdh11P55288 Gm42693-201ENSMUST00000196779 631 ntBASIC11.38□□□□□ -0.59
Cdh11P55288 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.38□□□□□ -0.59
Cdh11P55288 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.38□□□□□ -0.59
Cdh11P55288 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.38□□□□□ -0.59
Cdh11P55288 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.38□□□□□ -0.59
Cdh11P55288 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.38□□□□□ -0.59
Cdh11P55288 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh11P55288 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.38□□□□□ -0.59
Cdh11P55288 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.38□□□□□ -0.59
Cdh11P55288 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cdh11P55288 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cdh11P55288 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cdh11P55288 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdh11P55288 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdh11P55288 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.37□□□□□ -0.59
Cdh11P55288 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Cdh11P55288 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.37□□□□□ -0.59
Cdh11P55288 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Gm16202-201ENSMUST00000117532 544 ntBASIC11.37□□□□□ -0.59
Cdh11P55288 Gm6447-201ENSMUST00000118905 835 ntBASIC11.37□□□□□ -0.59
Cdh11P55288 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.37□□□□□ -0.59
Cdh11P55288 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.37□□□□□ -0.59
Cdh11P55288 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdh11P55288 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.37□□□□□ -0.59
Cdh11P55288 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Cdh11P55288 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.37□□□□□ -0.59
Cdh11P55288 Gm45331-201ENSMUST00000209868 554 ntBASIC11.37□□□□□ -0.59
Cdh11P55288 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cdh11P55288 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh11P55288 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.37□□□□□ -0.59
Cdh11P55288 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms