Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.75□□□□□ -0.37
SftpbP50405 Mir1894-201ENSMUST00000122802 81 ntBASIC12.75□□□□□ -0.37
SftpbP50405 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.75□□□□□ -0.37
SftpbP50405 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.75□□□□□ -0.37
SftpbP50405 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.75□□□□□ -0.37
SftpbP50405 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.75□□□□□ -0.37
SftpbP50405 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.75□□□□□ -0.37
SftpbP50405 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.75□□□□□ -0.37
SftpbP50405 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.75□□□□□ -0.37
SftpbP50405 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.75□□□□□ -0.37
SftpbP50405 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SftpbP50405 Gm10012-201ENSMUST00000078252 192 ntBASIC12.75□□□□□ -0.37
SftpbP50405 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SftpbP50405 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SftpbP50405 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.74□□□□□ -0.37
SftpbP50405 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SftpbP50405 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SftpbP50405 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.74□□□□□ -0.37
SftpbP50405 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SftpbP50405 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SftpbP50405 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.74□□□□□ -0.37
SftpbP50405 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.74□□□□□ -0.37
SftpbP50405 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.74□□□□□ -0.37
SftpbP50405 Gm22331-201ENSMUST00000158066 136 ntBASIC12.74□□□□□ -0.37
SftpbP50405 Gm16296-201ENSMUST00000159905 325 ntBASIC12.74□□□□□ -0.37
SftpbP50405 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.74□□□□□ -0.37
SftpbP50405 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SftpbP50405 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.74□□□□□ -0.37
SftpbP50405 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.74□□□□□ -0.37
SftpbP50405 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 Gm19163-201ENSMUST00000223313 780 ntBASIC12.74□□□□□ -0.37
SftpbP50405 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.74□□□□□ -0.37
SftpbP50405 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.74□□□□□ -0.37
SftpbP50405 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SftpbP50405 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.74□□□□□ -0.37
SftpbP50405 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SftpbP50405 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.73□□□□□ -0.37
SftpbP50405 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.73□□□□□ -0.37
SftpbP50405 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
SftpbP50405 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.73□□□□□ -0.37
SftpbP50405 Gm12363-201ENSMUST00000122250 668 ntBASIC12.73□□□□□ -0.37
SftpbP50405 Gm24196-201ENSMUST00000179161 110 ntBASIC12.73□□□□□ -0.37
SftpbP50405 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SftpbP50405 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.73□□□□□ -0.37
SftpbP50405 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.73□□□□□ -0.37
SftpbP50405 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.73□□□□□ -0.37
SftpbP50405 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.73□□□□□ -0.37
SftpbP50405 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SftpbP50405 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms