Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
GdnfP48540 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.65
GdnfP48540 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Map1b-203ENSMUST00000223725 2669 ntBASIC10.96□□□□□ -0.65
GdnfP48540 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.96□□□□□ -0.65
GdnfP48540 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.96□□□□□ -0.65
GdnfP48540 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.96□□□□□ -0.65
GdnfP48540 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.96□□□□□ -0.65
GdnfP48540 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
GdnfP48540 Gm19184-201ENSMUST00000196798 928 ntBASIC10.96□□□□□ -0.65
GdnfP48540 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.96□□□□□ -0.65
GdnfP48540 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.96□□□□□ -0.65
GdnfP48540 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.96□□□□□ -0.65
GdnfP48540 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
GdnfP48540 Gm18473-201ENSMUST00000220543 868 ntBASIC10.96□□□□□ -0.65
GdnfP48540 Gm8598-201ENSMUST00000221184 836 ntBASIC10.96□□□□□ -0.65
GdnfP48540 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.96□□□□□ -0.65
GdnfP48540 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
GdnfP48540 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
GdnfP48540 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
GdnfP48540 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
GdnfP48540 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
GdnfP48540 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
GdnfP48540 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
GdnfP48540 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
GdnfP48540 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.96□□□□□ -0.66
GdnfP48540 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
GdnfP48540 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
GdnfP48540 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.96□□□□□ -0.66
GdnfP48540 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
GdnfP48540 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
GdnfP48540 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
GdnfP48540 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
GdnfP48540 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
GdnfP48540 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.95□□□□□ -0.66
GdnfP48540 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
GdnfP48540 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.95□□□□□ -0.66
GdnfP48540 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.95□□□□□ -0.66
GdnfP48540 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
GdnfP48540 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.95□□□□□ -0.66
GdnfP48540 Gm11424-201ENSMUST00000121929 829 ntBASIC10.95□□□□□ -0.66
GdnfP48540 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.95□□□□□ -0.66
GdnfP48540 Gm38671-201ENSMUST00000200573 130 ntBASIC10.95□□□□□ -0.66
GdnfP48540 Gm7287-201ENSMUST00000205267 602 ntBASIC10.95□□□□□ -0.66
GdnfP48540 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.95□□□□□ -0.66
GdnfP48540 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
GdnfP48540 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.95□□□□□ -0.66
GdnfP48540 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
GdnfP48540 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
GdnfP48540 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
GdnfP48540 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
GdnfP48540 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.94□□□□□ -0.66
GdnfP48540 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.94□□□□□ -0.66
GdnfP48540 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
GdnfP48540 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
GdnfP48540 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms