Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prox1P48437 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.99□□□□□ -0.49
Prox1P48437 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Prox1P48437 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.99□□□□□ -0.49
Prox1P48437 Gm12341-201ENSMUST00000119724 503 ntBASIC11.99□□□□□ -0.49
Prox1P48437 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.99□□□□□ -0.49
Prox1P48437 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.99□□□□□ -0.49
Prox1P48437 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.99□□□□□ -0.49
Prox1P48437 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.99□□□□□ -0.49
Prox1P48437 Gm7653-201ENSMUST00000214567 508 ntBASIC11.99□□□□□ -0.49
Prox1P48437 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.99□□□□□ -0.49
Prox1P48437 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.99□□□□□ -0.49
Prox1P48437 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Prox1P48437 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Prox1P48437 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Prox1P48437 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Prox1P48437 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Prox1P48437 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Prox1P48437 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.98□□□□□ -0.49
Prox1P48437 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 Gm14350-201ENSMUST00000116642 640 ntBASIC11.98□□□□□ -0.49
Prox1P48437 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.98□□□□□ -0.49
Prox1P48437 Gm12490-201ENSMUST00000120255 560 ntBASIC11.98□□□□□ -0.49
Prox1P48437 Gm9630-201ENSMUST00000178304 885 ntBASIC11.98□□□□□ -0.49
Prox1P48437 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.98□□□□□ -0.49
Prox1P48437 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.98□□□□□ -0.49
Prox1P48437 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.98□□□□□ -0.49
Prox1P48437 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.98□□□□□ -0.49
Prox1P48437 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Prox1P48437 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Prox1P48437 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Prox1P48437 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Prox1P48437 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Prox1P48437 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Prox1P48437 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Prox1P48437 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.97□□□□□ -0.49
Prox1P48437 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.97□□□□□ -0.49
Prox1P48437 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Mir686-201ENSMUST00000102174 109 ntBASIC11.97□□□□□ -0.49
Prox1P48437 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.97□□□□□ -0.49
Prox1P48437 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.97□□□□□ -0.49
Prox1P48437 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.97□□□□□ -0.49
Prox1P48437 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.97□□□□□ -0.49
Prox1P48437 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.97□□□□□ -0.49
Prox1P48437 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.97□□□□□ -0.49
Prox1P48437 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Prox1P48437 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.97□□□□□ -0.49
Prox1P48437 Gm8515-201ENSMUST00000194852 576 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms