Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC8.39□□□□□ -1.07
Rpl28P41105 Mir6392-201ENSMUST00000184924 108 ntBASIC8.39□□□□□ -1.07
Rpl28P41105 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl28P41105 Ighv1-60-201ENSMUST00000195816 405 ntBASIC8.39□□□□□ -1.07
Rpl28P41105 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC8.39□□□□□ -1.07
Rpl28P41105 Gm42599-201ENSMUST00000201308 469 ntBASIC8.39□□□□□ -1.07
Rpl28P41105 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC8.39□□□□□ -1.07
Rpl28P41105 AC135669.1-201ENSMUST00000213585 412 ntBASIC8.39□□□□□ -1.07
Rpl28P41105 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC8.39□□□□□ -1.07
Rpl28P41105 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl28P41105 Gm15823-201ENSMUST00000064305 670 ntBASIC8.39□□□□□ -1.07
Rpl28P41105 Rn7sk-201ENSMUST00000083103 331 ntBASIC8.39□□□□□ -1.07
Rpl28P41105 Gm26315-201ENSMUST00000083890 321 ntBASIC8.39□□□□□ -1.07
Rpl28P41105 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC8.39□□□□□ -1.07
Rpl28P41105 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl28P41105 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Rpl28P41105 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl28P41105 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl28P41105 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC8.39□□□□□ -1.07
Rpl28P41105 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl28P41105 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Rpl28P41105 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl28P41105 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl28P41105 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC8.39□□□□□ -1.07
Rpl28P41105 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Rpl28P41105 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl28P41105 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rpl28P41105 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Rpl28P41105 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC8.39□□□□□ -1.07
Rpl28P41105 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Rpl28P41105 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC8.38□□□□□ -1.07
Rpl28P41105 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Gm2420-201ENSMUST00000119864 2149 ntBASIC8.38□□□□□ -1.07
Rpl28P41105 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Rpl28P41105 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
Rpl28P41105 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Gm7558-201ENSMUST00000193221 1165 ntBASIC8.38□□□□□ -1.07
Rpl28P41105 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC8.38□□□□□ -1.07
Rpl28P41105 Gm18624-201ENSMUST00000220966 658 ntBASIC8.38□□□□□ -1.07
Rpl28P41105 AC156560.2-201ENSMUST00000221232 264 ntBASIC8.38□□□□□ -1.07
Rpl28P41105 Gm5626-201ENSMUST00000222151 1058 ntBASIC8.38□□□□□ -1.07
Rpl28P41105 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Rpl28P41105 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC8.38□□□□□ -1.07
Rpl28P41105 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC8.38□□□□□ -1.07
Rpl28P41105 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Gm6157-201ENSMUST00000199935 1897 ntBASIC8.38□□□□□ -1.07
Rpl28P41105 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC8.38□□□□□ -1.07
Rpl28P41105 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Rpl28P41105 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Rpl28P41105 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC8.38□□□□□ -1.07
Rpl28P41105 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Ptprm-203ENSMUST00000224091 3773 ntBASIC8.38□□□□□ -1.07
Rpl28P41105 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Rpl28P41105 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rpl28P41105 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Rpl28P41105 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Rpl28P41105 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC8.37□□□□□ -1.07
Rpl28P41105 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC8.37□□□□□ -1.07
Rpl28P41105 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rpl28P41105 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms