Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.77□□□□□ -0.53
TP20293 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Gm23931-201ENSMUST00000103842 109 ntBASIC11.77□□□□□ -0.53
TP20293 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TP20293 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Gm11591-201ENSMUST00000120063 702 ntBASIC11.77□□□□□ -0.53
TP20293 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.77□□□□□ -0.53
TP20293 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.77□□□□□ -0.53
TP20293 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.77□□□□□ -0.53
TP20293 Gm25261-201ENSMUST00000157416 134 ntBASIC11.77□□□□□ -0.53
TP20293 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
TP20293 Gm5370-201ENSMUST00000187187 574 ntBASIC11.77□□□□□ -0.53
TP20293 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.77□□□□□ -0.53
TP20293 Gm37424-201ENSMUST00000191727 561 ntBASIC11.77□□□□□ -0.53
TP20293 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.77□□□□□ -0.53
TP20293 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.77□□□□□ -0.53
TP20293 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.77□□□□□ -0.53
TP20293 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.77□□□□□ -0.53
TP20293 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.77□□□□□ -0.53
TP20293 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.77□□□□□ -0.53
TP20293 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
TP20293 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TP20293 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.77□□□□□ -0.53
TP20293 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.77□□□□□ -0.53
TP20293 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
TP20293 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
TP20293 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.76□□□□□ -0.53
TP20293 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
TP20293 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
TP20293 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
TP20293 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.76□□□□□ -0.53
TP20293 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.76□□□□□ -0.53
TP20293 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.76□□□□□ -0.53
TP20293 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.76□□□□□ -0.53
TP20293 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.76□□□□□ -0.53
TP20293 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.76□□□□□ -0.53
TP20293 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.76□□□□□ -0.53
TP20293 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
TP20293 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
TP20293 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TP20293 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
TP20293 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
TP20293 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
TP20293 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.76□□□□□ -0.53
TP20293 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.76□□□□□ -0.53
TP20293 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
TP20293 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.76□□□□□ -0.53
TP20293 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TP20293 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.76□□□□□ -0.53
TP20293 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
TP20293 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TP20293 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
TP20293 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.75□□□□□ -0.53
TP20293 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TP20293 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TP20293 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TP20293 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TP20293 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.75□□□□□ -0.53
TP20293 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.75□□□□□ -0.53
TP20293 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms