Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
VimP20152 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
VimP20152 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.62□□□□□ -0.39
VimP20152 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
VimP20152 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.62□□□□□ -0.39
VimP20152 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.62□□□□□ -0.39
VimP20152 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
VimP20152 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.62□□□□□ -0.39
VimP20152 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
VimP20152 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VimP20152 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VimP20152 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.62□□□□□ -0.39
VimP20152 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
VimP20152 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VimP20152 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
VimP20152 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.62□□□□□ -0.39
VimP20152 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VimP20152 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VimP20152 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VimP20152 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VimP20152 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.61□□□□□ -0.39
VimP20152 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
VimP20152 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Gm22065-201ENSMUST00000103753 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm22066-201ENSMUST00000103761 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm24932-201ENSMUST00000103763 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm24115-201ENSMUST00000103799 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm22190-201ENSMUST00000103827 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm22191-201ENSMUST00000103831 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm24721-201ENSMUST00000103849 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm28018-201ENSMUST00000103869 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm26399-201ENSMUST00000103937 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm11978-201ENSMUST00000122315 466 ntBASIC12.61□□□□□ -0.39
VimP20152 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.61□□□□□ -0.39
VimP20152 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.61□□□□□ -0.39
VimP20152 Gm25349-201ENSMUST00000177728 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm23616-201ENSMUST00000177797 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm25871-201ENSMUST00000177816 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm24752-201ENSMUST00000178240 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm24496-201ENSMUST00000178287 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm25649-201ENSMUST00000178476 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm25548-201ENSMUST00000178681 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm23147-201ENSMUST00000178841 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VimP20152 Gm26095-201ENSMUST00000179270 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm22171-201ENSMUST00000179283 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm23936-201ENSMUST00000179354 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm22619-201ENSMUST00000179516 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm25255-201ENSMUST00000179579 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm24755-201ENSMUST00000179691 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm26506-201ENSMUST00000179692 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm25086-201ENSMUST00000179931 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm23243-201ENSMUST00000180047 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm24659-201ENSMUST00000180212 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm24169-201ENSMUST00000180244 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm23689-201ENSMUST00000180354 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm27359-201ENSMUST00000184153 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm27785-201ENSMUST00000184268 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm27466-201ENSMUST00000184396 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm27703-201ENSMUST00000184836 110 ntBASIC12.61□□□□□ -0.39
VimP20152 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms