Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
P06344 Gm27023-201ENSMUST00000182372 285 ntBASIC11.13□□□□□ -0.63
P06344 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.13□□□□□ -0.63
P06344 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.13□□□□□ -0.63
P06344 Gm31256-201ENSMUST00000194705 506 ntBASIC11.13□□□□□ -0.63
P06344 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
P06344 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.13□□□□□ -0.63
P06344 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
P06344 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.13□□□□□ -0.63
P06344 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.13□□□□□ -0.63
P06344 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.13□□□□□ -0.63
P06344 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
P06344 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
P06344 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
P06344 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
P06344 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
P06344 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
P06344 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
P06344 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
P06344 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
P06344 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.12□□□□□ -0.63
P06344 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
P06344 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Gm13315-201ENSMUST00000120376 991 ntBASIC11.12□□□□□ -0.63
P06344 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.12□□□□□ -0.63
P06344 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
P06344 Gm17376-201ENSMUST00000166016 84 ntBASIC11.12□□□□□ -0.63
P06344 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.12□□□□□ -0.63
P06344 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.12□□□□□ -0.63
P06344 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
P06344 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
P06344 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
P06344 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
P06344 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P06344 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P06344 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P06344 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
P06344 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.11□□□□□ -0.63
P06344 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P06344 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Gm23270-201ENSMUST00000104055 131 ntBASIC11.11□□□□□ -0.63
P06344 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.11□□□□□ -0.63
P06344 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Rmrp-201ENSMUST00000157463 271 ntBASIC11.11□□□□□ -0.63
P06344 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
P06344 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.11□□□□□ -0.63
P06344 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.11□□□□□ -0.63
P06344 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.11□□□□□ -0.63
P06344 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.11□□□□□ -0.63
P06344 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
P06344 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
P06344 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
P06344 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.11□□□□□ -0.63
P06344 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms