Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Itgb3O54890 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.21□□□□□ -0.29
Itgb3O54890 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.21□□□□□ -0.29
Itgb3O54890 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Itgb3O54890 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.21□□□□□ -0.29
Itgb3O54890 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Itgb3O54890 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Itgb3O54890 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Itgb3O54890 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Itgb3O54890 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Itgb3O54890 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Itgb3O54890 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Itgb3O54890 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Itgb3O54890 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.21□□□□□ -0.3
Itgb3O54890 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Itgb3O54890 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.21□□□□□ -0.3
Itgb3O54890 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Itgb3O54890 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Itgb3O54890 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Itgb3O54890 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Itgb3O54890 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Itgb3O54890 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Itgb3O54890 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.2□□□□□ -0.3
Itgb3O54890 Gm44958-201ENSMUST00000203734 736 ntBASIC13.2□□□□□ -0.3
Itgb3O54890 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Itgb3O54890 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Gzmn-202ENSMUST00000225535 989 ntBASIC13.2□□□□□ -0.3
Itgb3O54890 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.2□□□□□ -0.3
Itgb3O54890 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.2□□□□□ -0.3
Itgb3O54890 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Itgb3O54890 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Itgb3O54890 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Itgb3O54890 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Itgb3O54890 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Itgb3O54890 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Itgb3O54890 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.19□□□□□ -0.3
Itgb3O54890 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.19□□□□□ -0.3
Itgb3O54890 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.19□□□□□ -0.3
Itgb3O54890 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.19□□□□□ -0.3
Itgb3O54890 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.19□□□□□ -0.3
Itgb3O54890 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Itgb3O54890 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.19□□□□□ -0.3
Itgb3O54890 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.19□□□□□ -0.3
Itgb3O54890 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.19□□□□□ -0.3
Itgb3O54890 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.19□□□□□ -0.3
Itgb3O54890 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.19□□□□□ -0.3
Itgb3O54890 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Itgb3O54890 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.19□□□□□ -0.3
Itgb3O54890 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Itgb3O54890 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Itgb3O54890 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.19□□□□□ -0.3
Itgb3O54890 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.19□□□□□ -0.3
Itgb3O54890 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Itgb3O54890 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms