Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Atf6bO35451 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.88□□□□□ -0.67
Atf6bO35451 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Atf6bO35451 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.87□□□□□ -0.67
Atf6bO35451 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Atf6bO35451 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.87□□□□□ -0.67
Atf6bO35451 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.87□□□□□ -0.67
Atf6bO35451 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.87□□□□□ -0.67
Atf6bO35451 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.87□□□□□ -0.67
Atf6bO35451 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.87□□□□□ -0.67
Atf6bO35451 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Atf6bO35451 Gm3890-201ENSMUST00000182416 207 ntBASIC10.87□□□□□ -0.67
Atf6bO35451 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.87□□□□□ -0.67
Atf6bO35451 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.87□□□□□ -0.67
Atf6bO35451 Gm42693-201ENSMUST00000196779 631 ntBASIC10.87□□□□□ -0.67
Atf6bO35451 Gm43438-201ENSMUST00000198133 379 ntBASIC10.87□□□□□ -0.67
Atf6bO35451 Gm18584-201ENSMUST00000203098 964 ntBASIC10.87□□□□□ -0.67
Atf6bO35451 Gm18054-201ENSMUST00000207539 555 ntBASIC10.87□□□□□ -0.67
Atf6bO35451 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.87□□□□□ -0.67
Atf6bO35451 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.87□□□□□ -0.67
Atf6bO35451 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Atf6bO35451 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.87□□□□□ -0.67
Atf6bO35451 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Atf6bO35451 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Atf6bO35451 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Atf6bO35451 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.87□□□□□ -0.67
Atf6bO35451 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Atf6bO35451 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Atf6bO35451 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.86□□□□□ -0.67
Atf6bO35451 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Atf6bO35451 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Atf6bO35451 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Gm14921-201ENSMUST00000118643 908 ntBASIC10.86□□□□□ -0.67
Atf6bO35451 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.86□□□□□ -0.67
Atf6bO35451 Mir1938-201ENSMUST00000158746 100 ntBASIC10.86□□□□□ -0.67
Atf6bO35451 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.86□□□□□ -0.67
Atf6bO35451 Gm43133-201ENSMUST00000197472 463 ntBASIC10.86□□□□□ -0.67
Atf6bO35451 Gm19309-201ENSMUST00000218295 205 ntBASIC10.86□□□□□ -0.67
Atf6bO35451 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.86□□□□□ -0.67
Atf6bO35451 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Atf6bO35451 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Atf6bO35451 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Atf6bO35451 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atf6bO35451 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms