Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr1aO35134 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC18.82■□□□□ 0.6
Polr1aO35134 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Polr1aO35134 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr1aO35134 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr1aO35134 n-R5s84-201ENSMUST00000122591 109 ntBASIC18.82■□□□□ 0.6
Polr1aO35134 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC18.82■□□□□ 0.6
Polr1aO35134 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr1aO35134 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr1aO35134 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr1aO35134 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr1aO35134 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr1aO35134 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Polr1aO35134 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Polr1aO35134 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Polr1aO35134 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr1aO35134 Gm2420-201ENSMUST00000119864 2149 ntBASIC18.81■□□□□ 0.6
Polr1aO35134 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr1aO35134 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr1aO35134 Gm13668-201ENSMUST00000119237 1001 ntBASIC18.81■□□□□ 0.6
Polr1aO35134 Rn7s6-201ENSMUST00000175005 291 ntBASIC18.81■□□□□ 0.6
Polr1aO35134 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC18.81■□□□□ 0.6
Polr1aO35134 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC18.81■□□□□ 0.6
Polr1aO35134 CT025553.1-201ENSMUST00000226292 299 ntBASIC18.81■□□□□ 0.6
Polr1aO35134 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr1aO35134 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC18.81■□□□□ 0.6
Polr1aO35134 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Polr1aO35134 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC18.81■□□□□ 0.6
Polr1aO35134 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC18.81■□□□□ 0.6
Polr1aO35134 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Polr1aO35134 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Polr1aO35134 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Polr1aO35134 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr1aO35134 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Polr1aO35134 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Polr1aO35134 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Polr1aO35134 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC18.8■□□□□ 0.6
Polr1aO35134 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Polr1aO35134 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Gm4879-201ENSMUST00000122190 1272 ntBASIC18.8■□□□□ 0.6
Polr1aO35134 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC18.8■□□□□ 0.6
Polr1aO35134 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC18.8■□□□□ 0.6
Polr1aO35134 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC18.8■□□□□ 0.6
Polr1aO35134 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC18.8■□□□□ 0.6
Polr1aO35134 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC18.8■□□□□ 0.6
Polr1aO35134 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC18.8■□□□□ 0.6
Polr1aO35134 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Gm3765-201ENSMUST00000130985 1447 ntBASIC18.8■□□□□ 0.6
Polr1aO35134 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Polr1aO35134 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC18.8■□□□□ 0.6
Polr1aO35134 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Polr1aO35134 Gm23272-201ENSMUST00000104053 129 ntBASIC18.8■□□□□ 0.6
Polr1aO35134 Gm15744-201ENSMUST00000161734 213 ntBASIC18.8■□□□□ 0.6
Polr1aO35134 Gm10807-201ENSMUST00000177134 795 ntBASIC18.8■□□□□ 0.6
Polr1aO35134 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Polr1aO35134 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC18.8■□□□□ 0.6
Polr1aO35134 AC166341.2-201ENSMUST00000220571 120 ntBASIC18.8■□□□□ 0.6
Polr1aO35134 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Polr1aO35134 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr1aO35134 Gm44942-201ENSMUST00000096093 2072 ntBASIC18.79■□□□□ 0.6
Polr1aO35134 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr1aO35134 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr1aO35134 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr1aO35134 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr1aO35134 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr1aO35134 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr1aO35134 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr1aO35134 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC18.79■□□□□ 0.6
Polr1aO35134 Gm8155-201ENSMUST00000216363 1612 ntBASIC18.79■□□□□ 0.6
Polr1aO35134 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr1aO35134 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Polr1aO35134 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Polr1aO35134 Gm13182-201ENSMUST00000122241 312 ntBASIC18.79■□□□□ 0.6
Polr1aO35134 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC18.79■□□□□ 0.6
Polr1aO35134 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC18.79■□□□□ 0.6
Polr1aO35134 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Polr1aO35134 Gm28937-201ENSMUST00000185413 695 ntBASIC18.79■□□□□ 0.6
Polr1aO35134 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC18.79■□□□□ 0.6
Polr1aO35134 Gm29400-201ENSMUST00000187208 695 ntBASIC18.79■□□□□ 0.6
Polr1aO35134 Gm28662-201ENSMUST00000188446 695 ntBASIC18.79■□□□□ 0.6
Polr1aO35134 Gm28251-201ENSMUST00000188835 695 ntBASIC18.79■□□□□ 0.6
Polr1aO35134 Gm37318-201ENSMUST00000194325 695 ntBASIC18.79■□□□□ 0.6
Polr1aO35134 Gm38017-201ENSMUST00000194768 695 ntBASIC18.79■□□□□ 0.6
Polr1aO35134 Gm37287-201ENSMUST00000195449 695 ntBASIC18.79■□□□□ 0.6
Polr1aO35134 Gm37793-201ENSMUST00000195548 695 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms