Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim55G3X8Y1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim55G3X8Y1 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim55G3X8Y1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.8□□□□□ -0.36
Trim55G3X8Y1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim55G3X8Y1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Trim55G3X8Y1 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim55G3X8Y1 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Trim55G3X8Y1 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Rprl2-201ENSMUST00000157150 290 ntBASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Gm18737-201ENSMUST00000173594 937 ntBASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Rpph1-201ENSMUST00000175096 319 ntBASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Gm20553-201ENSMUST00000204205 844 ntBASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim55G3X8Y1 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Mir6990-201ENSMUST00000183724 91 ntBASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim55G3X8Y1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.78□□□□□ -0.36
Trim55G3X8Y1 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms