Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NpcdF8VQB8 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC15.01□□□□□ -0.01
NpcdF8VQB8 Gm12516-201ENSMUST00000120819 385 ntBASIC15.01□□□□□ -0.01
NpcdF8VQB8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Gm23218-201ENSMUST00000158124 276 ntBASIC15.01□□□□□ -0.01
NpcdF8VQB8 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Gm37028-201ENSMUST00000194276 107 ntBASIC15.01□□□□□ -0.01
NpcdF8VQB8 Gm39404-201ENSMUST00000216350 313 ntBASIC15.01□□□□□ -0.01
NpcdF8VQB8 AC153505.1-201ENSMUST00000218819 1071 ntBASIC15.01□□□□□ -0.01
NpcdF8VQB8 Mir219a-1-201ENSMUST00000083621 110 ntBASIC15.01□□□□□ -0.01
NpcdF8VQB8 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NpcdF8VQB8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15□□□□□ -0.01
NpcdF8VQB8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NpcdF8VQB8 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC15□□□□□ -0.01
NpcdF8VQB8 Gm12314-201ENSMUST00000118104 538 ntBASIC15□□□□□ -0.01
NpcdF8VQB8 Mup-ps26-201ENSMUST00000121751 202 ntBASIC15□□□□□ -0.01
NpcdF8VQB8 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15□□□□□ -0.01
NpcdF8VQB8 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC15□□□□□ -0.01
NpcdF8VQB8 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Mir6998-201ENSMUST00000183343 64 ntBASIC15□□□□□ -0.01
NpcdF8VQB8 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
NpcdF8VQB8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15□□□□□ -0.01
NpcdF8VQB8 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NpcdF8VQB8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NpcdF8VQB8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.99□□□□□ -0.01
NpcdF8VQB8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.99□□□□□ -0.01
NpcdF8VQB8 AC169511.2-201ENSMUST00000226674 2063 ntBASIC14.99□□□□□ -0.01
NpcdF8VQB8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Gm23596-201ENSMUST00000104304 132 ntBASIC14.99□□□□□ -0.01
NpcdF8VQB8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Gm13600-201ENSMUST00000117949 744 ntBASIC14.99□□□□□ -0.01
NpcdF8VQB8 Gm11451-201ENSMUST00000118946 630 ntBASIC14.99□□□□□ -0.01
NpcdF8VQB8 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Gm3793-201ENSMUST00000204973 672 ntBASIC14.99□□□□□ -0.01
NpcdF8VQB8 Gm17831-201ENSMUST00000205579 900 ntBASIC14.99□□□□□ -0.01
NpcdF8VQB8 Gm19091-201ENSMUST00000208120 978 ntBASIC14.99□□□□□ -0.01
NpcdF8VQB8 Gm17827-201ENSMUST00000211825 742 ntBASIC14.99□□□□□ -0.01
NpcdF8VQB8 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NpcdF8VQB8 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms