Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx6Q9R1R0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx6Q9R1R0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lhx6Q9R1R0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Lhx6Q9R1R0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Lhx6Q9R1R0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm14606-201ENSMUST00000117078 1155 ntBASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm12217-201ENSMUST00000118858 696 ntBASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm15754-201ENSMUST00000119191 478 ntBASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm16379-201ENSMUST00000161469 348 ntBASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm7211-201ENSMUST00000172692 1118 ntBASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm24420-201ENSMUST00000176676 59 ntBASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm8762-201ENSMUST00000193486 339 ntBASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm45845-201ENSMUST00000207326 582 ntBASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm44545-201ENSMUST00000208262 746 ntBASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 AC167192.4-201ENSMUST00000224087 993 ntBASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lhx6Q9R1R0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Smgc-204ENSMUST00000109277 855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Gm14900-201ENSMUST00000120304 733 ntBASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Gm2691-201ENSMUST00000203205 901 ntBASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Gm7443-201ENSMUST00000206355 378 ntBASIC12.32□□□□□ -0.44
Lhx6Q9R1R0 Gm44716-201ENSMUST00000209007 710 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms