Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.78□□□□□ -0.2
Prpf40aQ9R1C7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Prpf40aQ9R1C7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Prpf40aQ9R1C7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Prpf40aQ9R1C7 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Prpf40aQ9R1C7 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Gm13492-201ENSMUST00000119772 665 ntBASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Gm25261-201ENSMUST00000157416 134 ntBASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Gm24526-201ENSMUST00000082921 158 ntBASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Prpf40aQ9R1C7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Gm5781-201ENSMUST00000219792 443 ntBASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Prpf40aQ9R1C7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Gm43339-201ENSMUST00000200032 1606 ntBASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Gm5187-201ENSMUST00000117317 991 ntBASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Gm12957-201ENSMUST00000117835 377 ntBASIC13.75□□□□□ -0.21
Prpf40aQ9R1C7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms