Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Gm12203-201ENSMUST00000118235 598 ntBASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Gm12209-201ENSMUST00000120089 596 ntBASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Chaf1aQ9QWF0 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Gm10156-201ENSMUST00000122364 462 ntBASIC14□□□□□ -0.17
Chaf1aQ9QWF0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Chaf1aQ9QWF0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Gm37922-201ENSMUST00000195596 455 ntBASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chaf1aQ9QWF0 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms