Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Gm13297-201ENSMUST00000120205 934 ntBASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Gm18056-201ENSMUST00000207670 568 ntBASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Gm18061-201ENSMUST00000208350 562 ntBASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Gm18063-201ENSMUST00000208529 568 ntBASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Gm18052-201ENSMUST00000208750 559 ntBASIC11.63□□□□□ -0.55
Cdc40Q9DC48 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Gm5781-201ENSMUST00000219792 443 ntBASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdc40Q9DC48 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Mir877-201ENSMUST00000104738 85 ntBASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Gm23363-201ENSMUST00000175024 79 ntBASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.62□□□□□ -0.55
Cdc40Q9DC48 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Gm7046-201ENSMUST00000221351 977 ntBASIC11.62□□□□□ -0.55
Cdc40Q9DC48 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Mir339-201ENSMUST00000083659 96 ntBASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cdc40Q9DC48 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cdc40Q9DC48 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms