Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tmem54Q9D7S1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tmem54Q9D7S1 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tmem54Q9D7S1 Gm15198-201ENSMUST00000117283 177 ntBASIC10.96□□□□□ -0.65
Tmem54Q9D7S1 Gm11531-201ENSMUST00000117614 555 ntBASIC10.96□□□□□ -0.65
Tmem54Q9D7S1 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.96□□□□□ -0.65
Tmem54Q9D7S1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.96□□□□□ -0.65
Tmem54Q9D7S1 Gm9630-201ENSMUST00000178304 885 ntBASIC10.96□□□□□ -0.65
Tmem54Q9D7S1 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.96□□□□□ -0.65
Tmem54Q9D7S1 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.96□□□□□ -0.65
Tmem54Q9D7S1 Gm6621-201ENSMUST00000193251 772 ntBASIC10.96□□□□□ -0.65
Tmem54Q9D7S1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.96□□□□□ -0.65
Tmem54Q9D7S1 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.96□□□□□ -0.65
Tmem54Q9D7S1 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.96□□□□□ -0.65
Tmem54Q9D7S1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Tmem54Q9D7S1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Tmem54Q9D7S1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tmem54Q9D7S1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tmem54Q9D7S1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Tmem54Q9D7S1 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tmem54Q9D7S1 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tmem54Q9D7S1 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.96□□□□□ -0.66
Tmem54Q9D7S1 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tmem54Q9D7S1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tmem54Q9D7S1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Tmem54Q9D7S1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tmem54Q9D7S1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Tmem54Q9D7S1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.96□□□□□ -0.66
Tmem54Q9D7S1 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Tmem54Q9D7S1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Gm25043-201ENSMUST00000158604 212 ntBASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Gm2991-201ENSMUST00000173338 480 ntBASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Gm38266-201ENSMUST00000194931 421 ntBASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Gm6334-201ENSMUST00000207083 228 ntBASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Gm24136-201ENSMUST00000083374 165 ntBASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.95□□□□□ -0.66
Tmem54Q9D7S1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Gm11222-201ENSMUST00000119005 738 ntBASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Gm13570-201ENSMUST00000140763 309 ntBASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Cts7-204ENSMUST00000225321 1257 ntBASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tmem54Q9D7S1 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms