Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Syt7-204ENSMUST00000223586 1344 ntBASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chaf1bQ9D0N7 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Gm12341-201ENSMUST00000119724 503 ntBASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Gm28693-202ENSMUST00000190758 331 ntBASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Gm44397-201ENSMUST00000195950 113 ntBASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.71□□□□□ -0.53
Chaf1bQ9D0N7 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Chaf1bQ9D0N7 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms