Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.95□□□□□ -0.5
Shmt2Q9CZN7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt2Q9CZN7 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt2Q9CZN7 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt2Q9CZN7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.95□□□□□ -0.5
Shmt2Q9CZN7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt2Q9CZN7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt2Q9CZN7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt2Q9CZN7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt2Q9CZN7 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt2Q9CZN7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt2Q9CZN7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt2Q9CZN7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Mir686-201ENSMUST00000102174 109 ntBASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Gm37042-201ENSMUST00000193816 581 ntBASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 AY702102-202ENSMUST00000194651 1173 ntBASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Gm4768-201ENSMUST00000206199 686 ntBASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt2Q9CZN7 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Gm19163-201ENSMUST00000223313 780 ntBASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Shmt2Q9CZN7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shmt2Q9CZN7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Shmt2Q9CZN7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Shmt2Q9CZN7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms